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XP_008438098.1 protein (Cucumis melo) - STRING interaction network
"XP_008438098.1" - Peroxisomal membrane protein 11D in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438098.1Peroxisomal membrane protein 11D; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (235 aa)    
Predicted Functional Partners:
XP_008455616.1
ABC transporter D family member 1 (1326 aa)
     
 
  0.905
XP_008448966.1
Peroxisome biogenesis protein 5 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (743 aa)
     
 
  0.879
XP_008460147.1
Peroxisome biogenesis protein 16 isoform X1 (369 aa)
     
   
  0.879
XP_008453453.1
Peroxisome biogenesis protein 3-2 (373 aa)
     
 
  0.853
XP_008439741.1
Peroxisome biogenesis protein 7; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 5 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (316 aa)
     
   
  0.801
XP_008441822.1
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (393 aa)
     
 
  0.747
XP_008452775.1
Peroxisome biogenesis factor 10; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (393 aa)
     
 
  0.746
XP_008463911.1
(R)-specific enoyl-CoA hydratase; Hydroxyacyl-thioester dehydratase type 2, mitochondrial (206 aa)
     
 
  0.720
XP_008445304.1
enoyl-CoA hydratase 2, peroxisomal (309 aa)
     
 
  0.720
XP_008464561.1
Peroxisomal membrane protein PEX14 isoform X1 (523 aa)
       
 
  0.718
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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