STRINGSTRING
XP_008438099.1 protein (Cucumis melo) - STRING interaction network
"XP_008438099.1" - Vacuolar protein 8-like in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438099.1Vacuolar protein 8-like (559 aa)    
Predicted Functional Partners:
XP_008445453.1
Pentatricopeptide repeat-containing protein At1g26460, mitochondrial (618 aa)
           
  0.718
XP_008457065.1
Probable fructokinase-6, chloroplastic; Probable fructokinase-4; Belongs to the carbohydrate kinase PfkB family (384 aa)
     
   
  0.699
XP_008455361.1
Protein THYLAKOID FORMATION1, chloroplastic (298 aa)
           
  0.520
XP_008467254.1
Probable fructokinase-7 isoform X2; Fructokinase-1; Belongs to the carbohydrate kinase PfkB family (348 aa)
     
   
  0.421
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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