STRINGSTRING
XP_008438110.1 protein (Cucumis melo) - STRING interaction network
"XP_008438110.1" - RNA polymerase I termination factor in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438110.1RNA polymerase I termination factor; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns (533 aa)    
Predicted Functional Partners:
XP_008458847.1
Mitochondrial inner membrane protease ATP23; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns; Belongs to the peptidase M76 family (195 aa)
     
        0.866
XP_008457066.1
Uncharacterized protein LOC103496837 isoform X1 (385 aa)
     
        0.866
XP_008453772.1
Probable ribosome biogenesis protein LOC103494403; Probable pre-rRNA processing protein involved in ribosome biogenesis (267 aa)
     
        0.863
XP_008437504.1
Protein DYAD; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments (751 aa)
     
        0.863
XP_008452871.1
Uncharacterized protein At2g39795, mitochondrial (242 aa)
     
      0.862
XP_008441822.1
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (393 aa)
     
        0.861
XP_008444299.1
UPF0261 protein BPP1817-like; Uncharacterized protein LOC103487666 (362 aa)
     
        0.767
XP_008441125.1
UPF0261 protein y4oU; Uncharacterized protein LOC103485354 (571 aa)
     
        0.767
XP_008459468.1
Diacylglycerol O-acyltransferase 1 (533 aa)
     
        0.731
XP_008452207.1
snRNA-activating protein complex subunit 4 (798 aa)
           
  0.721
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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