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XP_008438139.1 protein (Cucumis melo) - STRING interaction network
"XP_008438139.1" - RING-H2 finger protein ATL48 in Cucumis melo
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438139.1RING-H2 finger protein ATL48 (82 aa)    
Predicted Functional Partners:
XP_008450167.1
Cytochrome c oxidase subunit 6a, mitochondrial (98 aa)
     
 
  0.943
XP_008454275.1
Cytochrome c oxidase subunit 5b-1, mitochondrial (179 aa)
     
 
  0.837
XP_008447480.1
Cytochrome c oxidase subunit 5b-1, mitochondrial (78 aa)
     
 
  0.837
XP_008451673.1
Probable mitochondrial-processing peptidase subunit beta isoform X1; Belongs to the peptidase M16 family (528 aa)
     
 
  0.813
XP_008453787.1
Cytochrome c oxidase assembly protein COX11, mitochondrial isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (337 aa)
     
 
  0.771
XP_008437180.1
Nudix hydrolase 14, chloroplastic (310 aa)
           
  0.724
XP_008465733.1
SURF1-like protein; Probably involved in the biogenesis of the COX complex (345 aa)
     
   
  0.717
XP_008465918.1
Putative cytochrome c oxidase subunit 6b-like (147 aa)
     
 
  0.647
XP_008452371.1
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport (77 aa)
     
 
  0.647
XP_008444857.1
Cytochrome c oxidase subunit 6b-1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 16 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns (190 aa)
     
 
  0.647
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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