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XP_008438141.1 protein (Cucumis melo) - STRING interaction network
"XP_008438141.1" - Ankyrin repeat and zinc finger domain-containing protein 1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438141.1Ankyrin repeat and zinc finger domain-containing protein 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (678 aa)    
Predicted Functional Partners:
XP_008457496.1
Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family (167 aa)
     
      0.866
XP_008437314.1
Phosphoglycerate mutase-like protein AT74H; Uncharacterized protein LOC103482772 (310 aa)
     
        0.866
XP_008465337.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (111 aa)
     
        0.864
XP_008443923.1
Protein OS-9 isoform X1 (294 aa)
     
        0.864
XP_008456920.1
Uroporphyrinogen decarboxylase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 13 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns; Belongs to the uroporphyrinogen decarboxylase family (395 aa)
     
        0.860
XP_008455119.1
pre-mRNA-splicing factor SLU7 (536 aa)
     
        0.860
XP_008451764.1
Uroporphyrinogen decarboxylase 1, chloroplastic isoform X1; Belongs to the uroporphyrinogen decarboxylase family (415 aa)
     
        0.860
XP_008438525.1
LOW QUALITY PROTEIN- pre-mRNA-splicing factor SLU7-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon (540 aa)
     
        0.860
XP_008440042.1
Katanin p60 ATPase-containing subunit A1 isoform X1; Spastin isoform X1; Belongs to the AAA ATPase family (592 aa)
     
 
  0.813
XP_008464542.1
Cell division cycle protein 48 homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (819 aa)
       
 
  0.804
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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