STRINGSTRING
XP_008438142.1 protein (Cucumis melo) - STRING interaction network
"XP_008438142.1" - Peptidyl-prolyl cis-trans isomerase in Cucumis melo
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
XP_008438142.1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (160 aa)    
Predicted Functional Partners:
XP_008448941.1
Copper chaperone for superoxide dismutase, chloroplastic/cytosolic isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns (328 aa)
     
      0.818
XP_008449060.1
Protein CWC15 homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 9 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns (229 aa)
     
 
  0.779
XP_008443561.1
WD repeat-containing protein 82; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (337 aa)
     
      0.723
XP_008440813.1
WD repeat-containing protein 82-B (332 aa)
     
      0.723
XP_008438467.1
pre-mRNA-processing factor 19; U-box domain-containing protein 72 (522 aa)
     
 
  0.717
XP_008439299.1
Protein SGT1 homolog (357 aa)
     
 
  0.714
XP_008453888.1
pre-mRNA-splicing factor 38A (397 aa)
     
 
  0.713
XP_008457362.1
PHD finger-like domain-containing protein 5B; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns (110 aa)
     
      0.711
XP_008462580.1
Probable small nuclear ribonucleoprotein G (80 aa)
     
      0.709
XP_008462238.1
Crooked neck-like protein 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (703 aa)
     
 
  0.704
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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