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XP_008438146.1 protein (Cucumis melo) - STRING interaction network
"XP_008438146.1" - 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438146.14-hydroxy-tetrahydrodipicolinate synthase, chloroplastic-like (369 aa)    
Predicted Functional Partners:
XP_008444110.1
Aspartate-semialdehyde dehydrogenase (375 aa)
   
 
  0.985
XP_008447745.1
4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic-like (333 aa)
     
 
  0.975
XP_008459583.1
Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 5 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (918 aa)
   
 
  0.966
XP_008460962.1
Diaminopimelate decarboxylase 2, chloroplastic-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 5 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns (482 aa)
   
  0.922
XP_008447719.1
Prohibitin-1, mitochondrial (290 aa)
   
        0.868
XP_008458394.1
Pumilio homolog 24 (658 aa)
     
        0.862
XP_008447504.1
Diaminopimelate epimerase, chloroplastic (364 aa)
   
   
  0.841
XP_008465539.1
Aspartokinase 2, chloroplastic-like isoform X1 (581 aa)
   
   
  0.796
XP_008451080.1
Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (377 aa)
   
   
  0.767
XP_008450986.1
Alpha-aminoadipic semialdehyde synthase isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 8 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (1050 aa)
   
   
  0.765
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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