STRINGSTRING
XP_008438149.1 protein (Cucumis melo) - STRING interaction network
"XP_008438149.1" - LOB domain-containing protein 18 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
XP_008438149.1LOB domain-containing protein 18 (231 aa)    
Predicted Functional Partners:
XP_008444600.1
WUSCHEL-related homeobox 4 (229 aa)
           
  0.616
XP_008452883.1
Aberrant root formation protein 4 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns (607 aa)
           
  0.615
XP_008450511.1
Cellulose synthase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily (1068 aa)
           
  0.580
XP_008459169.1
WEB family protein At3g02930, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns (879 aa)
           
  0.576
XP_008457035.1
RING-type E3 ubiquitin transferase; U-box domain-containing protein 21-like (442 aa)
           
  0.576
XP_008461877.1
LOB domain-containing protein 16; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns (236 aa)
     
 
0.549
XP_008461973.1
NAC domain-containing protein 7-like (179 aa)
           
  0.502
XP_008467059.1
Axial regulator YABBY 1-like (139 aa)
           
  0.434
XP_008448889.1
Protein YABBY 4-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (184 aa)
           
  0.434
XP_008460034.1
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (1110 aa)
           
  0.432
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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