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XP_008438151.1 protein (Cucumis melo) - STRING interaction network
"XP_008438151.1" - Pentatricopeptide repeat-containing protein At1g01970 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438151.1Pentatricopeptide repeat-containing protein At1g01970 (404 aa)    
Predicted Functional Partners:
XP_008448669.1
31 kDa ribonucleoprotein, chloroplastic (285 aa)
     
 
  0.729
XP_008455852.1
Peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic; Uncharacterized protein LOC103495917 (332 aa)
     
   
  0.709
XP_008448650.1
Plastoglobulin-1, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 7 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns (367 aa)
     
   
  0.703
XP_008458596.1
Flagellar radial spoke protein 5 isoform X3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (386 aa)
     
   
  0.703
XP_008455887.1
Probable membrane metalloprotease ARASP2, chloroplastic; Uncharacterized protein LOC103495966 (457 aa)
     
   
  0.693
XP_008444692.1
Transcription termination factor MTEF1, chloroplastic; Uncharacterized protein LOC103487950 (304 aa)
     
 
  0.650
XP_008464100.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns (252 aa)
     
   
  0.634
XP_008449782.1
Protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X1; Uncharacterized protein LOC103491567 (184 aa)
     
   
  0.624
XP_008437129.1
Thylakoid lumenal protein At1g12250, chloroplastic (281 aa)
     
   
  0.622
XP_008452278.1
Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (459 aa)
     
   
  0.622
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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