STRINGSTRING
XP_008438166.1 protein (Cucumis melo) - STRING interaction network
"XP_008438166.1" - Uncharacterized protein LOC103483355 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438166.1Uncharacterized protein LOC103483355 (217 aa)    
Predicted Functional Partners:
XP_008458214.1
Probable serine incorporator isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (402 aa)
           
  0.966
XP_008457771.1
Uncharacterized protein LOC103497381; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (312 aa)
           
  0.853
XP_008461193.1
LOW QUALITY PROTEIN- probable serine incorporator; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- substituted 1 base at 1 genomic stop codon (416 aa)
           
  0.596
XP_008458551.1
Serine incorporator 3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (411 aa)
           
  0.596
XP_008438411.1
Probable serine incorporator isoform X1 (485 aa)
           
  0.596
XP_008448815.1
Homeobox-leucine zipper protein HAT4 (362 aa)
           
  0.571
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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