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XP_008438171.1 protein (Cucumis melo) - STRING interaction network
"XP_008438171.1" - tRNA 2'-phosphotransferase 1 in Cucumis melo
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438171.1tRNA 2’-phosphotransferase 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (293 aa)    
Predicted Functional Partners:
XP_008447973.1
Ribonuclease II, chloroplastic/mitochondrial (783 aa)
     
   
  0.846
XP_008463899.1
tRNA-splicing endonuclease subunit Sen2-1 isoform X1 (278 aa)
     
   
  0.738
XP_008454415.1
Thymocyte nuclear protein 1 (201 aa)
           
  0.716
XP_008463274.1
Uncharacterized protein LOC103501474 (267 aa)
           
  0.661
XP_008448205.1
Formimidoyltransferase-cyclodeaminase isoform X2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments (427 aa)
     
      0.616
XP_008446980.1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (191 aa)
           
  0.584
XP_008461388.1
tRNA-m(4)X modification enzyme TRM13 homolog isoform X1 (457 aa)
           
  0.578
XP_008458074.1
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family (491 aa)
           
  0.576
XP_008454621.1
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family (624 aa)
           
  0.576
XP_008454914.1
Exosome complex exonuclease RRP44; Belongs to the RNR ribonuclease family (935 aa)
     
   
  0.564
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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