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XP_008438175.1 protein (Cucumis melo) - STRING interaction network
"XP_008438175.1" - 3-phosphoshikimate 1-carboxyvinyltransferase 2 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438175.13-phosphoshikimate 1-carboxyvinyltransferase 2; Belongs to the EPSP synthase family (526 aa)    
Predicted Functional Partners:
XP_008456472.1
Chorismate synthase, chloroplastic (439 aa)
   
  0.978
XP_008457898.1
Shikimate kinase, chloroplastic-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns (298 aa)
   
  0.968
XP_008440145.1
Shikimate kinase 1, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (300 aa)
   
  0.968
XP_008450164.1
Probable inactive shikimate kinase like 1, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 8 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns (307 aa)
   
  0.967
XP_008448531.1
3-dehydroquinate synthase, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 14 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns (452 aa)
 
 
   
  0.933
XP_008440089.1
Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like (529 aa)
 
 
   
  0.827
XP_008457914.1
Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like (541 aa)
 
 
   
  0.819
XP_008443422.1
3-dehydroquinate synthase homolog; Uncharacterized protein LOC103487013 (423 aa)
         
  0.757
XP_008438737.1
Glutamine synthetase leaf isozyme, chloroplastic (432 aa)
   
   
  0.749
XP_008452187.1
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic isoform X1 (304 aa)
         
  0.741
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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