STRINGSTRING
XP_008438176.1 protein (Cucumis melo) - STRING interaction network
"XP_008438176.1" - Transketolase, chloroplastic in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438176.1Transketolase, chloroplastic (742 aa)    
Predicted Functional Partners:
XP_008454148.1
Transaldolase; Uncharacterized protein LOC103494637 (441 aa)
 
  0.984
XP_008444383.1
Ribulose-phosphate 3-epimerase, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns (283 aa)
  0.984
XP_008453653.1
Transaldolase-like; Uncharacterized protein LOC103494305 (398 aa)
 
  0.983
XP_008437125.1
Probable transaldolase (405 aa)
 
  0.982
XP_008441351.1
Ribulose-phosphate 3-epimerase, cytoplasmic isoform (226 aa)
 
  0.981
XP_008463213.1
Sedoheptulose-1,7-bisphosphatase, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 mRNAs, 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns (388 aa)
   
 
  0.971
XP_008449974.1
Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 12 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (404 aa)
 
  0.969
XP_008457647.1
Triosephosphate isomerase, chloroplastic (306 aa)
   
  0.968
XP_008464129.1
Triosephosphate isomerase, cytosolic-like (249 aa)
   
  0.964
XP_008442057.1
Triosephosphate isomerase, cytosolic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 30 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns (254 aa)
   
  0.964
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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