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XP_008438199.1 protein (Cucumis melo) - STRING interaction network
"XP_008438199.1" - tRNA in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438199.1tRNA (Guanine-N(7)-)-methyltransferase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (313 aa)    
Predicted Functional Partners:
XP_008451330.1
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit; Belongs to the WD repeat TRM82 family (431 aa)
     
 
  0.988
XP_008447182.1
tRNA (guanine(10)-N2)-methyltransferase homolog (480 aa)
   
   
  0.948
XP_008459104.1
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A isoform X1 (367 aa)
   
 
  0.921
XP_008444796.1
tRNA (Adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns (452 aa)
     
   
  0.891
XP_008454886.1
H/ACA ribonucleoprotein complex subunit 2-like protein (159 aa)
   
      0.878
XP_008438877.1
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (187 aa)
     
   
  0.877
XP_008459398.1
Probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 (581 aa)
     
   
  0.876
XP_008456934.1
tRNA (guanine(26)-N(2))-dimethyltransferase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (440 aa)
     
   
  0.876
XP_008467285.1
Probable rRNA-processing protein EBP2 homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns (307 aa)
     
        0.866
XP_008466499.1
Uncharacterized protein LOC103503892 isoform X1; DNA-directed RNA polymerase I subunit rpa43 isoform X1 (231 aa)
     
        0.866
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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