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XP_008438209.1 protein (Cucumis melo) - STRING interaction network
"XP_008438209.1" - AUGMIN subunit 7 isoform X1 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438209.1AUGMIN subunit 7 isoform X1; Uncharacterized protein LOC103483382 (334 aa)    
Predicted Functional Partners:
XP_008464568.1
AUGMIN subunit 5; Uncharacterized protein LOC103502409 isoform X1 (801 aa)
           
  0.931
XP_008447737.1
AUGMIN subunit 4; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (430 aa)
           
  0.931
XP_008450061.1
LOW QUALITY PROTEIN- AUGMIN subunit 6; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- substituted 1 base at 1 genomic stop codon (733 aa)
           
  0.870
XP_008447221.1
HAUS augmin-like complex subunit 3 isoform X1 (624 aa)
           
  0.855
XP_008456411.1
AUGMIN subunit 2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns (301 aa)
           
  0.821
XP_008455693.1
AUGMIN subunit 1; Uncharacterized protein LOC103495806 (297 aa)
           
  0.818
XP_008451780.1
Probable solanesyl-diphosphate synthase 3, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns; Belongs to the FPP/GGPP synthase family (421 aa)
           
  0.738
XP_008457448.1
Serine/arginine repetitive matrix protein 1 (893 aa)
           
  0.632
XP_008461878.1
Poly [ADP-ribose] polymerase 1 isoform X1 (980 aa)
           
  0.630
XP_008453469.1
AT-hook motif nuclear-localized protein 16; Putative DNA-binding protein ESCAROLA (279 aa)
           
  0.627
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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