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XP_008438212.1 protein (Cucumis melo) - STRING interaction network
"XP_008438212.1" - Pentatricopeptide repeat-containing protein At3g03580 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
XP_008438212.1Pentatricopeptide repeat-containing protein At3g03580 (895 aa)    
Predicted Functional Partners:
XP_008448458.1
DNA mismatch repair protein MLH3 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (1219 aa)
           
  0.750
XP_008450011.1
Uncharacterized protein LOC103491727 (421 aa)
           
  0.726
XP_008437781.1
LOW QUALITY PROTEIN- uncharacterized protein LOC103483113; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 2 bases in 2 codons (1550 aa)
           
  0.724
XP_008454389.1
Mitotic checkpoint protein BUB3.2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 6 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (341 aa)
       
 
  0.705
XP_008441473.1
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1733 aa)
           
  0.614
XP_008460141.1
UTP-RNA uridylyltransferase 1; Uncharacterized protein LOC103499041 (751 aa)
           
  0.612
XP_008461703.1
poly(A) RNA polymerase GLD2 isoform X1 (468 aa)
           
  0.572
XP_008461191.1
26S protease regulatory subunit 7; Belongs to the AAA ATPase family (426 aa)
           
  0.520
XP_008461521.1
Uncharacterized protein LOC103500093 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns (1341 aa)
           
  0.482
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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