STRINGSTRING
XP_008438216.1 protein (Cucumis melo) - STRING interaction network
"XP_008438216.1" - Light-mediated development protein DET1 isoform X1 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438216.1Light-mediated development protein DET1 isoform X1 (578 aa)    
Predicted Functional Partners:
XP_008449820.1
Constitutive photomorphogenesis protein 10; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns; Belongs to the ubiquitin-conjugating enzyme family (185 aa)
       
 
  0.979
XP_008458987.1
E3 ubiquitin-protein ligase COP1-like (706 aa)
       
  0.975
XP_008456402.1
E3 ubiquitin-protein ligase COP1 isoform X1 (675 aa)
       
  0.975
XP_008444949.1
DNA damage-binding protein 1 (1091 aa)
       
 
  0.954
XP_008444359.1
Cullin-4; Belongs to the cullin family (829 aa)
       
 
  0.952
XP_008464043.1
Protein DAMAGED DNA-BINDING 2 (622 aa)
         
  0.950
XP_008466392.1
Transcription factor HY5 (157 aa)
       
 
  0.941
bZIP2
Uncharacterized protein LOC103488299; Transcription factor HY5-like (158 aa)
       
 
  0.941
XP_008438090.1
COP9 signalosome complex subunit 1 (450 aa)
       
 
  0.913
XP_008466585.1
COP9 signalosome complex subunit 4; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (397 aa)
       
 
  0.890
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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