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XP_008438219.1 protein (Cucumis melo) - STRING interaction network
"XP_008438219.1" - Uncharacterized metal-dependent hydrolase YabD isoform X1 in Cucumis melo
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second shell of interactors
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
XP_008438219.1Uncharacterized metal-dependent hydrolase YabD isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns (314 aa)    
Predicted Functional Partners:
XP_008462833.1
SUMO-conjugating enzyme SCE1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 12 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns; Belongs to the ubiquitin-conjugating enzyme family (160 aa)
     
      0.693
XP_008451044.1
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (394 aa)
   
   
  0.582
XP_008446660.1
Sec-independent protein translocase protein TATC, chloroplastic (347 aa)
         
  0.577
XP_008450744.1
Sec-independent protein translocase protein TATA, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns (158 aa)
         
  0.568
XP_008450791.1
arginine--tRNA ligase, cytoplasmic-like isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family (645 aa)
   
   
  0.557
XP_008456911.1
Probable RNA-binding protein EIF1AD (169 aa)
           
  0.553
XP_008438156.1
ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase (691 aa)
           
  0.513
XP_008460959.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (528 aa)
   
   
  0.503
XP_008457070.1
Protease Do-like 7 isoform X1 (1154 aa)
   
   
  0.487
XP_008461019.1
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9; Belongs to the complex I LYR family (116 aa)
           
  0.480
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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