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XP_008438246.1 protein (Cucumis melo) - STRING interaction network
"XP_008438246.1" - WD-40 repeat-containing protein MSI1 in Cucumis melo
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
XP_008438246.1WD-40 repeat-containing protein MSI1 (423 aa)    
Predicted Functional Partners:
XP_008454560.1
Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (370 aa)
     
 
  0.993
XP_008441042.1
Chromatin assembly factor 1 subunit FAS2 isoform X1 (479 aa)
     
 
  0.974
XP_008457853.1
NASP-related protein sim3; Nuclear autoantigenic sperm protein (479 aa)
     
 
  0.973
XP_008453856.1
Polycomb group protein EMBRYONIC FLOWER 2 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (639 aa)
       
 
  0.969
XP_008457756.1
Histone-lysine N-methyltransferase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (923 aa)
     
 
  0.968
XP_008454284.1
Histone-lysine N-methyltransferase EZA1 isoform X1 (892 aa)
     
 
  0.968
XP_008448794.1
Polycomb group protein EMBRYONIC FLOWER 2 (433 aa)
       
 
  0.958
XP_008446982.1
Retinoblastoma-related protein isoform X1 (1025 aa)
     
 
  0.956
XP_008459220.1
Histone acetyltransferase type B catalytic subunit; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (464 aa)
     
 
  0.952
XP_008443431.1
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (642 aa)
     
 
  0.927
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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