STRINGSTRING
XP_008438250.1 protein (Cucumis melo) - STRING interaction network
"XP_008438250.1" - DNA replication ATP-dependent helicase/nuclease DNA2 in Cucumis melo
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438250.1DNA replication ATP-dependent helicase/nuclease DNA2 (1379 aa)    
Predicted Functional Partners:
XP_008453322.1
WD repeat and HMG-box DNA-binding protein 1 isoform X1 (963 aa)
     
 
  0.988
XP_008462871.1
Exonuclease 1 (576 aa)
   
 
  0.978
XP_008443763.1
Exonuclease 1 (685 aa)
   
 
  0.978
XP_008462416.1
MMS19 nucleotide excision repair protein homolog isoform X1 (1151 aa)
     
 
  0.944
XP_008462637.1
DNA polymerase delta catalytic subunit (1086 aa)
     
 
  0.930
XP_008465451.1
ATP-dependent DNA helicase PIF2-like; Belongs to the helicase family (191 aa)
   
 
  0.898
XP_008454685.1
ATP-dependent DNA helicase PIF1-like; Belongs to the helicase family (337 aa)
   
 
  0.898
XP_008460162.1
Flap endonuclease GEN-like 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns (608 aa)
   
 
  0.897
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (418 aa)
   
 
  0.897
XP_008439213.1
Flap endonuclease GEN-like 2 isoform X1 (565 aa)
   
 
  0.897
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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