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XP_008438261.1 protein (Cucumis melo) - STRING interaction network
"XP_008438261.1" - 39S ribosomal protein L18, mitochondrial-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438261.139S ribosomal protein L18, mitochondrial-like (185 aa)    
Predicted Functional Partners:
XP_008441144.1
50S ribosomal protein L18-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns (190 aa)
   
   
 
0.802
XP_008459355.1
Uncharacterized protein LOC103498514; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (332 aa)
         
 
0.800
XP_008439021.1
50S ribosomal protein L18, chloroplastic (170 aa)
         
    0.800
XP_008445861.1
Ubiquitin carboxyl-terminal hydrolase 24; Belongs to the peptidase C19 family (542 aa)
     
 
  0.507
XP_008463697.1
30S ribosomal protein S20, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns (184 aa)
     
      0.455
XP_008461583.1
30S ribosomal protein 3, chloroplastic-like (192 aa)
     
 
  0.453
XP_008460582.1
Squamous cell carcinoma antigen recognized by T-cells 3 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (829 aa)
     
 
  0.452
XP_008438484.1
50S ribosomal protein L28, chloroplastic (150 aa)
     
 
  0.450
XP_008441337.1
50S ribosomal protein L27, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns (183 aa)
     
 
  0.446
XP_008457921.1
Ubiquitin carboxyl-terminal hydrolase 27; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns; Belongs to the peptidase C19 family (557 aa)
     
 
  0.444
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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