STRINGSTRING
XP_008438279.1 protein (Cucumis melo) - STRING interaction network
"XP_008438279.1" - Probable receptor-like protein kinase At5g47070 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438279.1Probable receptor-like protein kinase At5g47070 (426 aa)    
Predicted Functional Partners:
XP_008459792.1
Myb-related protein 308-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (306 aa)
       
 
  0.713
XP_008450053.1
Transcription repressor MYB6; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns (295 aa)
       
 
  0.640
XP_008448244.1
Uncharacterized protein LOC103490495 isoform X1 (406 aa)
           
  0.631
XP_008448352.1
Ankyrin repeat-containing protein At5g02620; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (547 aa)
       
 
  0.602
XP_008447608.1
Probable histone H2A.4 (153 aa)
       
 
  0.587
XP_008455052.1
Ribosomal RNA small subunit methyltransferase E; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (296 aa)
           
  0.584
XP_008454422.1
Uncharacterized protein LOC103494832 (217 aa)
           
  0.584
XP_008465948.1
Protein ABCI7, chloroplastic-like (503 aa)
           
  0.566
XP_008459036.1
Protein EXORDIUM-like 7; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (333 aa)
           
  0.566
XP_008443629.1
Protein IQ-DOMAIN 1 (433 aa)
           
  0.550
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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