STRINGSTRING
XP_008438323.1 protein (Cucumis melo) - STRING interaction network
"XP_008438323.1" - Werner Syndrome-like exonuclease in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438323.1Werner Syndrome-like exonuclease (314 aa)    
Predicted Functional Partners:
XP_008460413.1
ATP-dependent DNA helicase; Mediator of RNA polymerase II transcription subunit 34 isoform X1; Belongs to the helicase family. RecQ subfamily (708 aa)
 
 
 
  0.909
XP_008455993.1
Exonuclease mut-7 homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns (523 aa)
     
   
  0.864
XP_008453932.1
ATP-dependent DNA helicase 2 subunit KU70 (626 aa)
     
 
  0.847
XP_008438156.1
ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase (691 aa)
       
 
  0.808
XP_008442389.1
Transcription factor bHLH140 (747 aa)
           
  0.728
XP_008463840.1
Glucan endo-1,3-beta-glucosidase 9 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns; Belongs to the glycosyl hydrolase 17 family (487 aa)
           
  0.723
XP_008451883.1
ATPase WRNIP1 (542 aa)
       
 
  0.722
XP_008459885.1
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns; Belongs to the helicase family. RecQ subfamily (729 aa)
 
 
 
  0.680
XP_008466326.1
Replication protein A 32 kDa subunit A-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (271 aa)
     
 
  0.649
XP_008453602.1
Replication protein A 32 kDa subunit B-like (277 aa)
     
 
  0.649
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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