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XP_008438327.1 protein (Cucumis melo) - STRING interaction network
"XP_008438327.1" - Chaperone protein dnaJ 20, chloroplastic-like in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
XP_008438327.1Chaperone protein dnaJ 20, chloroplastic-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns (230 aa)    
Predicted Functional Partners:
XP_008464666.1
Heat shock 70 kDa protein 17 (898 aa)
 
 
  0.957
XP_008437399.1
Luminal-binding protein 5; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 18 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns; Belongs to the heat shock protein 70 family (665 aa)
 
 
  0.825
XP_008465078.1
Heat shock 70 kDa protein 16 (762 aa)
 
 
  0.769
XP_008462146.1
Heat shock 70 kDa protein 15-like (844 aa)
 
 
  0.766
XP_008461924.1
Stromal 70 kDa heat shock-related protein, chloroplastic-like (677 aa)
 
 
  0.698
XP_008457143.1
Stromal 70 kDa heat shock-related protein, chloroplastic (705 aa)
 
 
  0.698
XP_008450536.1
Heat shock 70 kDa protein (650 aa)
 
 
  0.696
XP_008454446.1
Heat shock 70 kDa protein, mitochondrial (680 aa)
 
 
  0.695
XP_008458906.1
Heat shock cognate 70 kDa protein 2-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 5 ESTs, 82 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns; Belongs to the heat shock protein 70 family (652 aa)
 
 
  0.695
XP_008458892.1
Heat shock cognate 70 kDa protein (648 aa)
 
 
  0.695
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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