STRINGSTRING
XP_008438340.1 protein (Cucumis melo) - STRING interaction network
"XP_008438340.1" - Uncharacterized protein LOC103483470 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438340.1Uncharacterized protein LOC103483470 (231 aa)    
Predicted Functional Partners:
XP_008456407.1
Small ubiquitin-related modifier 1 (100 aa)
       
 
  0.874
XP_008449477.1
Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (106 aa)
       
 
  0.874
XP_008449142.1
Small ubiquitin-related modifier 1-like (166 aa)
       
 
  0.874
XP_008460924.1
kxDL motif-containing protein CG10681 (124 aa)
       
      0.816
XP_008462833.1
SUMO-conjugating enzyme SCE1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 12 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns; Belongs to the ubiquitin-conjugating enzyme family (160 aa)
       
 
  0.726
XP_008452775.1
Peroxisome biogenesis factor 10; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (393 aa)
       
 
  0.635
XP_008457028.1
TATA-binding protein-associated factor BTAF1 (2052 aa)
     
   
  0.634
XP_008458087.1
Uncharacterized protein LOC103497624 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns (2449 aa)
           
  0.623
XP_008463706.1
E3 SUMO-protein ligase MMS21 (248 aa)
           
  0.614
XP_008445861.1
Ubiquitin carboxyl-terminal hydrolase 24; Belongs to the peptidase C19 family (542 aa)
     
 
  0.599
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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