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CmGal2 protein (Cucumis melo) - STRING interaction network
"CmGal2" - Beta-galactosidase 9 isoform X1 in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CmGal2Beta-galactosidase 9 isoform X1 (889 aa)    
Predicted Functional Partners:
XP_008456481.1
Uncharacterized protein LOC103496424 isoform X1 (615 aa)
         
  0.631
XP_008448944.1
Histone deacetylase complex subunit SAP18-like (166 aa)
           
  0.631
XP_008443026.1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling (191 aa)
           
  0.631
XP_008439152.1
Programmed cell death protein 4-like (709 aa)
           
  0.631
XP_008443105.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1681 aa)
           
  0.630
XP_008439419.1
Galactan beta-1,4-galactosyltransferase GALS3-like; Uncharacterized protein LOC103484233 (497 aa)
           
  0.630
XP_008437180.1
Nudix hydrolase 14, chloroplastic (310 aa)
           
  0.630
XP_008438581.1
CRM-domain containing factor CFM3A, chloroplastic/mitochondrial-like; Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like (881 aa)
           
  0.620
XP_008466185.1
Bet1-like protein At1g29060; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 8 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns (136 aa)
           
  0.582
XP_008453333.1
Uridine-cytidine kinase C isoform X1 (662 aa)
           
  0.582
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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