STRINGSTRING
XP_008438350.1 protein (Cucumis melo) - STRING interaction network
"XP_008438350.1" - LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438350.1LOW QUALITY PROTEIN- chromatin assembly factor 1 subunit A; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (193 aa)    
Predicted Functional Partners:
XP_008463108.1
Conserved oligomeric Golgi complex subunit 2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns (754 aa)
       
      0.791
XP_008441104.1
Microtubule-associated protein 70-5-like (488 aa)
       
      0.791
XP_008441473.1
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1733 aa)
       
      0.688
XP_008449586.1
Uncharacterized protein At5g41620 (474 aa)
       
      0.586
XP_008442880.1
Uncharacterized protein At5g41620 (668 aa)
       
      0.586
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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