STRINGSTRING
XP_008438353.1 protein (Cucumis melo) - STRING interaction network
"XP_008438353.1" - Uncharacterized protein At1g04910 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438353.1Uncharacterized protein At1g04910 (523 aa)    
Predicted Functional Partners:
XP_008459097.1
Uncharacterized protein LOC103498309; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (450 aa)
           
  0.719
XP_008449622.1
Uncharacterized protein LOC103491452 (618 aa)
           
  0.600
XP_008466626.1
Uncharacterized protein LOC103503985 isoform X1 (500 aa)
           
  0.594
XP_008463157.1
Uncharacterized protein LOC103501366 isoform X1 (546 aa)
           
  0.593
XP_008451613.1
Uncharacterized protein LOC103492844 (517 aa)
           
  0.578
XP_008465040.1
Uncharacterized protein LOC103502751; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (628 aa)
           
  0.572
XP_008451086.1
LOW QUALITY PROTEIN- uncharacterized protein LOC103492463; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 1 base in 1 codon (542 aa)
           
  0.572
XP_008454676.1
Microtubule-binding protein TANGLED; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (430 aa)
           
  0.568
XP_008456133.1
Glycoprotein 3-alpha-L-fucosyltransferase A-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (514 aa)
           
  0.555
XP_008454950.1
Glycoprotein 3-alpha-L-fucosyltransferase A-like isoform X1 (513 aa)
           
  0.555
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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