STRINGSTRING
XP_008438354.1 protein (Cucumis melo) - STRING interaction network
"XP_008438354.1" - Myb family transcription factor APL isoform X1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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Textmining
[Homology]
Score
XP_008438354.1Myb family transcription factor APL isoform X1 (315 aa)    
Predicted Functional Partners:
XP_008459619.1
Phosducin-like protein 3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns (254 aa)
           
  0.703
XP_008444218.1
Conserved oligomeric Golgi complex subunit 6 (720 aa)
       
      0.688
XP_008437951.1
Anaphase-promoting complex subunit 8 (577 aa)
       
      0.688
XP_008460826.1
Probable glucan 1,3-alpha-glucosidase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns; Belongs to the glycosyl hydrolase 31 family (917 aa)
           
  0.630
XP_008449224.1
Uncharacterized protein LOC103491166 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (478 aa)
           
  0.630
XP_008440381.1
BTB/POZ and TAZ domain-containing protein 4 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (467 aa)
           
  0.630
XP_008446447.1
Cell division control protein 48 homolog B; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns; Belongs to the AAA ATPase family (614 aa)
           
  0.614
XP_008444782.1
Protein BASIC PENTACYSTEINE6 (338 aa)
           
  0.584
XP_008449927.1
CRC domain-containing protein TSO1 (586 aa)
           
  0.582
XP_008449293.1
Non-specific serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (430 aa)
           
  0.582
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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