STRINGSTRING
XP_008438379.1 protein (Cucumis melo) - STRING interaction network
"XP_008438379.1" - Cellulose synthase-like protein D1 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438379.1Cellulose synthase-like protein D1; Belongs to the glycosyltransferase 2 family (1047 aa)    
Predicted Functional Partners:
XP_008439711.1
Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 (275 aa)
           
  0.853
XP_008451402.1
Hexosyltransferase; Probable galacturonosyltransferase-like 4; Belongs to the glycosyltransferase 8 family (403 aa)
           
  0.737
XP_008450023.1
Sialyltransferase-like protein 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (480 aa)
           
  0.704
XP_008456343.1
Conserved oligomeric Golgi complex subunit 5; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (846 aa)
           
  0.632
XP_008444218.1
Conserved oligomeric Golgi complex subunit 6 (720 aa)
           
  0.632
XP_008441924.1
Conserved oligomeric Golgi complex subunit 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (1057 aa)
           
  0.632
XP_008460560.1
Conserved oligomeric Golgi complex subunit 3 (778 aa)
           
  0.630
XP_008458050.1
Hexosyltransferase; Galacturonosyltransferase 8; Belongs to the glycosyltransferase 8 family (566 aa)
           
  0.615
XP_008457595.1
Hexosyltransferase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns; Belongs to the glycosyltransferase 8 family (567 aa)
           
  0.615
XP_008448292.1
Callose synthase 12-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns (1767 aa)
       
 
  0.606
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (6%) [HD]