STRINGSTRING
XP_008438441.1 protein (Cucumis melo) - STRING interaction network
"XP_008438441.1" - Transcription factor MYB24-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438441.1Transcription factor MYB24-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (296 aa)    
Predicted Functional Partners:
XP_008441083.1
RNA polymerase II transcription factor B subunit 2; Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA (434 aa)
     
   
  0.634
XP_008456709.1
RING-H2 finger protein ATL16 isoform X1 (197 aa)
       
 
  0.631
XP_008455348.1
Protein ULTRAPETALA 1-like (235 aa)
           
  0.631
XP_008451334.1
Transcription repressor OFP12-like; Uncharacterized protein LOC103492656 (263 aa)
           
  0.631
XP_008464341.1
Signal peptide peptidase-like 5 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (542 aa)
       
 
  0.619
XP_008442623.1
WRKY transcription factor 44 isoform X1 (482 aa)
           
  0.609
XP_008439162.1
Dehydration-responsive element-binding protein 1A (212 aa)
           
  0.588
XP_008459404.1
E3 ubiquitin-protein ligase At3g02290; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (227 aa)
       
 
  0.586
XP_008456608.1
Transcription factor DIVARICATA (233 aa)
     
   
  0.579
XP_008440393.1
Transcription factor DIVARICATA-like (273 aa)
     
   
  0.579
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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