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XP_008438450.1 protein (Cucumis melo) - STRING interaction network
"XP_008438450.1" - DNA mismatch repair protein MSH1, mitochondrial isoform X1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
XP_008438450.1DNA mismatch repair protein MSH1, mitochondrial isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (1152 aa)    
Predicted Functional Partners:
XP_008449115.1
DNA mismatch repair protein MSH5 isoform X1 (824 aa)
     
 
0.982
XP_008453367.1
DNA mismatch repair protein MSH2 isoform X1; Component of the post-replicative DNA mismatch repair system (MMR) (942 aa)
     
 
0.980
XP_008462637.1
DNA polymerase delta catalytic subunit (1086 aa)
     
 
  0.959
XP_008457764.1
DNA polymerase alpha catalytic subunit (1548 aa)
     
 
  0.955
XP_008461344.1
Structural maintenance of chromosomes protein 5 isoform X2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (1053 aa)
     
 
  0.947
XP_008464617.1
DNA repair protein recA homolog 2, mitochondrial isoform X1; Belongs to the RecA family (400 aa)
   
 
  0.946
XP_008460959.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (528 aa)
   
   
  0.937
XP_008456763.1
DNA replication licensing factor MCM5; Belongs to the MCM family (735 aa)
     
 
  0.935
XP_008449833.1
Structural maintenance of chromosomes protein 3 isoform X1 (1203 aa)
     
 
  0.934
XP_008464069.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (266 aa)
     
 
  0.929
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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