STRINGSTRING
XP_008438478.1 protein (Cucumis melo) - STRING interaction network
"XP_008438478.1" - Boron transporter 1-like in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438478.1Boron transporter 1-like (717 aa)    
Predicted Functional Partners:
XP_008464398.1
Auxin efflux carrier component; May act as a component of the auxin efflux carrier (616 aa)
       
 
  0.631
XP_008453480.1
Auxin efflux carrier component; May act as a component of the auxin efflux carrier (608 aa)
       
 
  0.631
XP_008455137.1
Peptidyl-prolyl cis-trans isomerase FKBP12 (112 aa)
       
 
  0.618
XP_008445441.1
Peptidyl-prolyl cis-trans isomerase E (171 aa)
           
  0.598
XP_008457223.1
Adenosylhomocysteinase 1 (485 aa)
       
 
  0.582
XP_008438321.1
Adenosylhomocysteinase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (485 aa)
       
 
  0.582
XP_008450285.1
RING-type E3 ubiquitin transferase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns (404 aa)
           
  0.580
XP_008449598.1
RING-type E3 ubiquitin transferase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (414 aa)
           
  0.580
XP_008442921.1
E3 ubiquitin-protein ligase PUB23-like (406 aa)
           
  0.580
XP_008441961.1
E3 ubiquitin-protein ligase PUB22-like (426 aa)
           
  0.580
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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