STRINGSTRING
XP_008438486.1 protein (Cucumis melo) - STRING interaction network
"XP_008438486.1" - Tetratricopeptide repeat protein 7B-like in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438486.1Tetratricopeptide repeat protein 7B-like (732 aa)    
Predicted Functional Partners:
XP_008455234.1
Nucleolar protein 10 (708 aa)
           
  0.707
XP_008457937.1
Phosphatidylinositol 4-kinase alpha 1; Belongs to the PI3/PI4-kinase family (2022 aa)
     
 
  0.670
XP_008447043.1
Phosphatidylinositol 4-kinase alpha 1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns; Belongs to the PI3/PI4-kinase family (2037 aa)
     
 
  0.670
XP_008462258.1
CCAAT/enhancer-binding protein zeta (1025 aa)
           
  0.629
XP_008464046.1
Villin-1 (906 aa)
           
  0.628
XP_008446305.1
Allantoate deiminase (538 aa)
           
  0.585
XP_008455808.1
ER membrane protein complex subunit 2 (303 aa)
     
   
  0.579
XP_008456520.1
Armadillo repeat-containing kinesin-like protein 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (1054 aa)
           
  0.569
XP_008451418.1
Protein SLOW WALKER 1; U3 small nucleolar RNA-associated protein 15 homolog (528 aa)
           
  0.561
XP_008437259.1
Uncharacterized protein LOC103482740 (792 aa)
     
   
  0.558
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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