STRINGSTRING
XP_008438498.1 protein (Cucumis melo) - STRING interaction network
"XP_008438498.1" - Glycolipid transfer protein in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438498.1Glycolipid transfer protein (202 aa)    
Predicted Functional Partners:
XP_008455602.1
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis (533 aa)
     
   
  0.613
XP_008457185.1
Uncharacterized protein LOC103496924 (145 aa)
           
  0.576
XP_008459365.1
Membrane-anchored ubiquitin-fold protein; May serve as docking site to facilitate the association of other proteins to the plasma membrane (125 aa)
           
  0.565
XP_008451014.1
Calpain-type cysteine protease DEK1; Belongs to the peptidase C2 family (2162 aa)
           
  0.563
XP_008466362.1
Protein FAM192A; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (213 aa)
           
  0.552
XP_008442198.1
Lipid phosphate phosphatase delta; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns (405 aa)
     
   
  0.487
XP_008439317.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns; Belongs to the pyruvate kinase family (573 aa)
           
  0.483
XP_008462374.1
ESCRT-related protein CHMP1B; Charged multivesicular body protein 1; Belongs to the SNF7 family (203 aa)
     
   
  0.423
XP_008447589.1
ESCRT-related protein CHMP1B-like; Charged multivesicular body protein 1-like; Belongs to the SNF7 family (203 aa)
     
   
  0.423
XP_008446431.1
Triose phosphate/phosphate translocator, chloroplastic-like (420 aa)
           
  0.422
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (10%) [HD]