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XP_008438510.1 protein (Cucumis melo) - STRING interaction network
"XP_008438510.1" - Putative E3 ubiquitin-protein ligase XBAT35 isoform X1 in Cucumis melo
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second shell of interactors
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
XP_008438510.1Putative E3 ubiquitin-protein ligase XBAT35 isoform X1 (476 aa)    
Predicted Functional Partners:
XP_008441126.1
LOW QUALITY PROTEIN- protein HYPER-SENSITIVITY-RELATED 4-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- deleted 2 bases in 1 codon (938 aa)
     
   
  0.903
XP_008464487.1
Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 (637 aa)
     
        0.866
XP_008459337.1
Uncharacterized protein LOC103498471 (442 aa)
     
        0.865
XP_008447262.1
Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (614 aa)
     
        0.865
XP_008448321.1
LOW QUALITY PROTEIN- NAC transcription factor 29-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (305 aa)
     
        0.837
XP_008447882.1
Protein FEZ-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (282 aa)
     
        0.837
XP_008460124.1
Protein transport Sec1a-like isoform X1; Belongs to the STXBP/unc-18/SEC1 family (672 aa)
     
   
  0.816
XP_008441199.1
Uncharacterized protein LOC103485404; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns (184 aa)
           
  0.816
XP_008464140.1
Putative E3 ubiquitin-protein ligase XBAT31 (447 aa)
           
  0.728
NBP35
Cytosolic Fe-S cluster assembly factor NBP35; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. Functions as Fe-S scaffold, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. Essential for embryo development (356 aa)
           
  0.614
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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