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XP_008438517.1 protein (Cucumis melo) - STRING interaction network
"XP_008438517.1" - 60S ribosomal protein L7-4-like in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438517.160S ribosomal protein L7-4-like (246 aa)    
Predicted Functional Partners:
XP_008452010.1
40S ribosomal protein S10-1-like (182 aa)
     
 
  0.988
XP_008443016.1
60S ribosomal protein L21-1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 40 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (164 aa)
     
 
  0.984
XP_008446192.1
ubiquitin-40S ribosomal protein S27a (156 aa)
     
 
  0.975
XP_008453452.1
Guanine nucleotide-binding protein subunit beta-like protein (327 aa)
     
 
  0.974
XP_008457630.1
40S ribosomal protein S12-like; Belongs to the eukaryotic ribosomal protein eS12 family (140 aa)
 
  0.972
XP_008456579.1
Uncharacterized RNA-binding protein C1827.05c (212 aa)
     
 
  0.972
XP_008462725.1
40S ribosomal protein S24-1; Belongs to the eukaryotic ribosomal protein eS24 family (137 aa)
   
 
  0.971
XP_008455742.1
40S ribosomal protein S24; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 73 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns; Belongs to the eukaryotic ribosomal protein eS24 family (137 aa)
   
 
  0.971
XP_008460497.1
60S ribosomal protein L30-like (112 aa)
   
 
  0.970
XP_008451087.1
60S ribosomal protein L30 (111 aa)
   
 
  0.970
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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