STRINGSTRING
XP_008438540.1 protein (Cucumis melo) - STRING interaction network
"XP_008438540.1" - Transcription factor bHLH104-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438540.1Transcription factor bHLH104-like (226 aa)    
Predicted Functional Partners:
XP_008453423.1
Uncharacterized protein LOC103494137 isoform X1 (1256 aa)
       
 
  0.703
XP_008446618.1
Uncharacterized protein LOC103489298 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 mRNAs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (1215 aa)
       
 
  0.703
XP_008453494.1
Nicotianamine synthase 1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (279 aa)
           
  0.573
XP_008453473.1
Probable nicotianamine synthase 4 isoform X1 (321 aa)
           
  0.573
XP_008446771.1
Neutral/alkaline invertase 3, chloroplastic; Alkaline/neutral invertase CINV1 (644 aa)
           
  0.527
XP_008453195.1
Transcription factor bHLH47; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (253 aa)
       
 
0.461
XP_008459604.1
Ethylene-responsive transcription factor ERF021; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments (188 aa)
           
  0.422
XP_008455703.1
Transcription factor bHLH100-like (249 aa)
           
  0.420
XP_008455701.1
Transcription factor bHLH101-like (210 aa)
           
  0.420
XP_008448155.1
Protein FAR1-RELATED SEQUENCE 9 (550 aa)
           
  0.420
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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