STRINGSTRING
XP_008438544.1 protein (Cucumis melo) - STRING interaction network
"XP_008438544.1" - Uncharacterized protein LOC103483606 in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438544.1Uncharacterized protein LOC103483606; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (205 aa)    
Predicted Functional Partners:
XP_008454088.1
Probable complex I intermediate-associated protein 30 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (229 aa)
     
 
  0.874
XP_008445083.1
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns (106 aa)
     
 
  0.708
XP_008460070.1
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like (171 aa)
     
 
  0.705
XP_008461019.1
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9; Belongs to the complex I LYR family (116 aa)
     
      0.704
XP_008457988.1
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B (105 aa)
       
      0.704
XP_008456633.1
Probable mitochondrial import inner membrane translocase subunit TIM21 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (326 aa)
           
  0.704
XP_008456518.1
LOW QUALITY PROTEIN- sorting and assembly machinery component 50 homolog; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (536 aa)
       
      0.704
XP_008460702.1
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B (143 aa)
       
 
  0.634
XP_008464391.1
Mitochondrial import inner membrane translocase subunit TIM8; Belongs to the small Tim family (77 aa)
       
      0.633
XP_008464263.1
Proactivator polypeptide-like 1 (233 aa)
       
      0.633
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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