STRINGSTRING
XP_008438564.1 protein (Cucumis melo) - STRING interaction network
"XP_008438564.1" - MATH domain-containing protein At5g43560 isoform X1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
XP_008438564.1MATH domain-containing protein At5g43560 isoform X1 (1136 aa)    
Predicted Functional Partners:
XP_008442334.1
Uncharacterized protein LOC103486237 isoform X1 (901 aa)
     
   
  0.853
XP_008442487.1
Uncharacterized protein LOC103486341 (260 aa)
           
  0.853
XP_008442039.1
Protein PNS1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns; Belongs to the CTL (choline transporter-like) family (455 aa)
           
  0.706
XP_008459469.1
HEAT repeat-containing protein 5B isoform X1 (2218 aa)
           
  0.704
XP_008459833.1
Beclin-1-like protein isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (509 aa)
           
  0.632
XP_008449780.1
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (326 aa)
           
  0.627
XP_008450649.1
cyclin-L1-1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns; Belongs to the cyclin family (443 aa)
     
   
  0.613
XP_008458083.1
Uncharacterized protein LOC103497620 (1020 aa)
           
  0.570
XP_008461013.1
SH3 domain-containing protein 2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (375 aa)
           
  0.555
XP_008444332.1
Phosphatidylinositol 3-kinase, root isoform isoform X2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments; Belongs to the PI3/PI4-kinase family (867 aa)
     
   
  0.429
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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