STRINGSTRING
XP_008438582.1 protein (Cucumis melo) - STRING interaction network
"XP_008438582.1" - PRA1 family protein in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438582.1PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (176 aa)    
Predicted Functional Partners:
XP_008463685.1
PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (235 aa)
           
  0.852
XP_008462680.1
pre-mRNA-splicing factor SPF27 homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns (256 aa)
           
  0.810
XP_008438246.1
WD-40 repeat-containing protein MSI1 (423 aa)
           
  0.747
NPR1
Regulatory protein NPR3-like (586 aa)
           
  0.725
XP_008460094.1
Chromo domain-containing protein LHP1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (454 aa)
           
  0.631
XP_008438194.1
Chromo domain protein LHP1-like (409 aa)
           
  0.631
XP_008460508.1
Cysteine-rich repeat secretory protein 60 (275 aa)
           
  0.598
XP_008442509.1
PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (209 aa)
           
  0.598
XP_008460097.1
Cysteine-rich repeat secretory protein 15 (296 aa)
           
  0.548
XP_008446165.1
ABC transporter B family member 26, chloroplastic isoform X1 (701 aa)
           
  0.485
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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