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XP_008438631.1 protein (Cucumis melo) - STRING interaction network
"XP_008438631.1" - Protein tesmin/TSO1-like CXC 2 in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438631.1Protein tesmin/TSO1-like CXC 2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (788 aa)    
Predicted Functional Partners:
XP_008446982.1
Retinoblastoma-related protein isoform X1 (1025 aa)
     
 
  0.815
XP_008460621.1
Protein ALWAYS EARLY 2-like (1074 aa)
     
 
  0.807
XP_008438872.1
Protein ALWAYS EARLY 3 isoform X1 (1138 aa)
     
 
  0.807
XP_008450003.1
Ribonucleoside-diphosphate reductase small chain (329 aa)
     
   
  0.743
XP_008450857.1
WD-40 repeat-containing protein MSI4 (518 aa)
     
 
  0.590
XP_008447958.1
WD-40 repeat-containing protein MSI2-like (393 aa)
     
 
  0.590
XP_008438246.1
WD-40 repeat-containing protein MSI1 (423 aa)
     
 
  0.590
XP_008440381.1
BTB/POZ and TAZ domain-containing protein 4 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (467 aa)
     
 
  0.589
XP_008440385.1
Uncharacterized protein LOC103484848 isoform X1 (1258 aa)
     
        0.583
XP_008449224.1
Uncharacterized protein LOC103491166 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns (478 aa)
           
  0.582
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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