STRINGSTRING
XP_008438660.1 protein (Cucumis melo) - STRING interaction network
"XP_008438660.1" - Uncharacterized protein LOC103483702 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438660.1Uncharacterized protein LOC103483702 (357 aa)    
Predicted Functional Partners:
XP_008444406.1
Uncharacterized protein LOC103487744 (528 aa)
     
        0.864
XP_008442020.1
Syntaxin-124; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns; Belongs to the syntaxin family (303 aa)
     
        0.828
XP_008441971.1
Syntaxin-related protein KNOLLE; Belongs to the syntaxin family (309 aa)
     
        0.828
XP_008458859.1
Putative GPI-anchored protein PB15E9.01c isoform X1 (573 aa)
     
        0.699
XP_008440837.1
Uncharacterized protein LOC103485142 isoform X1 (504 aa)
     
        0.642
XP_008462206.1
7-dehydrocholesterol reductase (435 aa)
           
  0.582
XP_008461811.1
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1490 aa)
     
        0.559
XP_008454576.1
Scarecrow-like protein 21; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 8 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns; Belongs to the GRAS family (594 aa)
           
  0.545
XP_008440083.1
Scarecrow-like protein 13; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 84 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns; Belongs to the GRAS family (541 aa)
           
  0.483
XP_008460522.1
DELLA protein GAI-like; Belongs to the GRAS family (603 aa)
           
  0.482
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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