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XP_008438671.1 protein (Cucumis melo) - STRING interaction network
"XP_008438671.1" - Pentatricopeptide repeat-containing protein At4g14850 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438671.1Pentatricopeptide repeat-containing protein At4g14850; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (606 aa)    
Predicted Functional Partners:
XP_008450011.1
Uncharacterized protein LOC103491727 (421 aa)
 
       
  0.723
XP_008449369.1
ETO1-like protein 1 isoform X1 (890 aa)
           
  0.630
XP_008444951.1
Rho GTPase-activating protein REN1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns (968 aa)
           
  0.630
XP_008441978.1
Uncharacterized protein LOC103485979 (708 aa)
           
  0.630
XP_008441315.1
Pentatricopeptide repeat-containing protein At5g14080 isoform X1 (640 aa)
           
  0.617
XP_008444296.1
Uncharacterized mitochondrial protein ymf11 (697 aa)
           
  0.602
XP_008466167.1
LOW QUALITY PROTEIN- ubiquitin carboxyl-terminal hydrolase 16-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon; deleted 2 bases in 1 codon (1030 aa)
           
  0.515
XP_008444939.1
Ubiquitin carboxyl-terminal hydrolase 16-like isoform X1 (1115 aa)
           
  0.515
XP_008456056.1
Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like; Uncharacterized protein At3g15000, mitochondrial-like (213 aa)
       
 
  0.511
XP_008451724.1
Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial; Uncharacterized protein At3g15000, mitochondrial (427 aa)
       
 
  0.511
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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