STRINGSTRING
XP_008438676.1 protein (Cucumis melo) - STRING interaction network
"XP_008438676.1" - Transcription repressor OFP12-like in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438676.1Transcription repressor OFP12-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (205 aa)    
Predicted Functional Partners:
XP_008439714.1
Transcription repressor OFP5; Uncharacterized protein LOC103484429 (468 aa)
           
  0.702
XP_008453732.1
Transcription repressor OFP7; Beta-adducin (301 aa)
           
  0.700
XP_008465302.1
Transcription repressor OFP17; Uncharacterized protein LOC103502957 (189 aa)
           
  0.630
XP_008463402.1
Transcription repressor OFP8-like; Uncharacterized protein LOC103501571 (265 aa)
           
  0.604
XP_008460883.1
Transcription repressor OFP8-like; Uncharacterized protein LOC103499623 (237 aa)
           
  0.604
XP_008452787.1
Uncharacterized protein LOC103493702; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments (119 aa)
           
  0.572
XP_008463251.1
Transcription repressor OFP1; Uncharacterized protein LOC103501454 (331 aa)
           
  0.532
XP_008442333.1
Transcription repressor OFP2-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments (380 aa)
           
  0.532
XP_008439805.1
PTI1-like tyrosine-protein kinase At3g15890 (372 aa)
           
  0.482
XP_008444513.1
Uncharacterized membrane protein C2G11.09-like isoform X1 (742 aa)
           
  0.420
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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