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XP_008438685.1 protein (Cucumis melo) - STRING interaction network
"XP_008438685.1" - LOW QUALITY PROTEIN: plant UBX domain-containing protein 10-like in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438685.1LOW QUALITY PROTEIN- plant UBX domain-containing protein 10-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (371 aa)    
Predicted Functional Partners:
XP_008464944.1
Rhomboid-like protein 20; Ubiquitin-associated domain-containing protein 2-like (291 aa)
     
 
  0.913
XP_008443923.1
Protein OS-9 isoform X1 (294 aa)
     
 
  0.909
XP_008437660.1
NPL4-like protein 1 (411 aa)
     
 
  0.866
XP_008454875.1
Phospholipase A-2-activating protein (757 aa)
     
 
  0.782
XP_008439056.1
Protein CbxX, chromosomal; Caseinolytic peptidase B protein homolog (479 aa)
     
 
  0.768
XP_008453882.1
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (286 aa)
     
 
  0.757
XP_008450797.1
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (242 aa)
     
 
  0.757
XP_008439975.1
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (244 aa)
     
 
  0.757
XP_008464542.1
Cell division cycle protein 48 homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (819 aa)
     
 
  0.755
XP_008462466.1
Cell division cycle protein 48 homolog (807 aa)
     
 
  0.755
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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