STRINGSTRING
XP_008438697.1 protein (Cucumis melo) - STRING interaction network
"XP_008438697.1" - RAN GTPase-activating protein 2 isoform X1 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438697.1RAN GTPase-activating protein 2 isoform X1 (552 aa)    
Predicted Functional Partners:
XP_008462833.1
SUMO-conjugating enzyme SCE1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 12 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns; Belongs to the ubiquitin-conjugating enzyme family (160 aa)
     
 
  0.950
XP_008462135.1
Nuclear pore complex protein NUP50A isoform X1; E3 SUMO-protein ligase RanBP2 isoform X1 (466 aa)
     
 
  0.873
XP_008457357.1
Ran-binding protein 1 homolog a-like (219 aa)
     
 
  0.873
XP_008457356.1
Ran-binding protein 1 homolog a-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 18 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns (216 aa)
     
 
  0.873
XP_008465002.1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
     
 
  0.871
XP_008465001.1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (254 aa)
     
 
  0.871
XP_008465000.1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
     
 
  0.871
XP_008445165.1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
     
 
  0.871
XP_008444707.1
Deoxyuridine 5’-triphosphate nucleotidohydrolase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns (257 aa)
     
        0.862
XP_008455662.1
Protein EXPORTIN 1A; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns (1076 aa)
     
 
  0.860
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (11%) [HD]