STRINGSTRING
XP_008438718.1 protein (Cucumis melo) - STRING interaction network
"XP_008438718.1" - Basic 7S globulin-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438718.1Basic 7S globulin-like; Belongs to the peptidase A1 family (436 aa)    
Predicted Functional Partners:
XP_008451376.1
Uncharacterized protein LOC103492685 (248 aa)
           
  0.701
XP_008455830.1
Blue copper protein-like (255 aa)
           
  0.568
XP_008451349.1
pre-mRNA-splicing factor 18 (420 aa)
           
  0.567
XP_008451352.1
N-alpha-acetyltransferase 20 (174 aa)
           
  0.565
XP_008458487.1
ervatamin-B-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns; Belongs to the peptidase C1 family (346 aa)
       
 
  0.511
XP_008451371.1
Uncharacterized protein LOC103492681 isoform X1 (277 aa)
           
  0.499
XP_008460868.1
Protein artemis; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns (623 aa)
     
   
  0.425
XP_008451374.1
DNA repair helicase XPD isoform X2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns (758 aa)
           
  0.422
XP_008442942.1
Uncharacterized protein At3g28850; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (291 aa)
           
  0.422
XP_008440317.1
Small RNA degrading nuclease 1 (527 aa)
           
  0.422
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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