STRINGSTRING
XP_008438720.1 protein (Cucumis melo) - STRING interaction network
"XP_008438720.1" - WAG22 antigen in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438720.1WAG22 antigen; Keratin, type I cytoskeletal 9 (500 aa)    
Predicted Functional Partners:
XP_008466749.1
Uncharacterized protein LOC103504088; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (703 aa)
           
  0.847
XP_008467213.1
valine--tRNA ligase, mitochondrial 1; valine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (1045 aa)
           
  0.704
XP_008448549.1
Cold shock domain-containing protein 3 (272 aa)
           
  0.619
XP_008464282.1
Leucine-rich repeat extensin-like protein 3 (299 aa)
           
  0.575
XP_008463438.1
Early nodulin-like protein 3 (210 aa)
           
  0.575
XP_008454534.1
Early nodulin-like protein 3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns (244 aa)
           
  0.575
XP_008440982.1
Protein PXR1-like (238 aa)
           
  0.575
XP_008441563.1
Bidirectional sugar transporter SWEET; Mediates both low-affinity uptake and efflux of sugar across the membrane (252 aa)
           
  0.574
XP_008461387.1
Uncharacterized protein LOC103499982 (647 aa)
           
  0.572
XP_008465866.1
Plasminogen activator inhibitor 1 RNA-binding protein-like (358 aa)
           
  0.514
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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