STRINGSTRING
XP_008438722.1 protein (Cucumis melo) - STRING interaction network
"XP_008438722.1" - Probable E3 ubiquitin-protein ligase LUL4 in Cucumis melo
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008438722.1Probable E3 ubiquitin-protein ligase LUL4 (400 aa)    
Predicted Functional Partners:
XP_008438723.1
Uncharacterized protein LOC103483746 (142 aa)
 
       
  0.703
XP_008448262.1
Transmembrane E3 ubiquitin-protein ligase 1-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns (579 aa)
     
   
  0.629
XP_008438828.1
Zinc finger CCCH domain-containing protein 34 (481 aa)
           
  0.623
XP_008465337.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (111 aa)
     
   
  0.589
XP_008461740.1
Protein DA1-related 2 (468 aa)
           
  0.589
XP_008455493.1
Cation-transporting ATPase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 mRNAs, 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns (1192 aa)
           
  0.553
XP_008463298.1
RING finger and transmembrane domain-containing protein 2 (471 aa)
     
 
  0.506
XP_008456974.1
RING finger and transmembrane domain-containing protein 1-like (478 aa)
     
 
  0.506
XP_008459781.1
tRNA wybutosine-synthesizing protein 4 (340 aa)
           
  0.476
XP_008452114.1
Probable ubiquitin-conjugating enzyme E2 16; Belongs to the ubiquitin-conjugating enzyme family (161 aa)
     
 
  0.475
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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